BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A07LP1|AL426136
(767 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig934 1471 0.0
>3x_Contig934
Length = 4039
Score = 1471 bits (741), Expect = 0.0
Identities = 761/767 (99%), Gaps = 1/767 (0%)
Strand = Plus / Plus
Query: 1 gtcaagatgcaagttcagaatgttgtttcgctccaagttcgctccaatgaagaatgattt 60
|||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 2673 gtcaagatgcaagtacagaatgttgat-cgctccaagttcgctccaatgaagaatgattt 2731
Query: 61 gatgctcagagcagctttaggtgagaaggttgaaagaccaccatgttggattatgagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2732 gatgctcagagcagctttaggtgagaaggttgaaagaccaccatgttggattatgagaca 2791
Query: 121 ggctggacgttatttaccagaataccatgaggtgaagaatggtcgtgactttttcgagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2792 ggctggacgttatttaccagaataccatgaggtgaagaatggtcgtgactttttcgagac 2851
Query: 181 atgtcgtgatgcagaaattgcttcagaaattactattcagcccgtgagacgttacgccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2852 atgtcgtgatgcagaaattgcttcagaaattactattcagcccgtgagacgttacgccgg 2911
Query: 241 tttattggatgcagccattatcttcagtgatattcttgtgatccctcaggccatgggtat 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2912 tttattggatgcagctattatcttcagtgatattcttgtgatccctcaggccatgggtat 2971
Query: 301 gaaagttgagatggttgaggggaaaggccctcatttcccggaaccgttgagaactgaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2972 gaaagttgagatggttgaggggaaaggccctcatttcccggaaccgttgagaactgaaga 3031
Query: 361 gcaactacaaaaggtattggattataaggtcaacgttttagacgaactagaatgggcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3032 gcaactacaaaaggtattggattataaggtcaacgttttagacgaactagaatgggcctt 3091
Query: 421 taaagctatcactatgactcgtactaaattggacggccaagtgcctttgttaggtttctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3092 taaagctatcactatgactcgtactaaattggacggccaagtgcctttgttaggtttctg 3151
Query: 481 tggtgctccatggacgttattggtttatatgaccgagggtggtggatcgcgtttattcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3152 tggtgctccatggacgttattggtttatatgaccgagggtggtggatcgcgtttattcag 3211
Query: 541 attcgctaagcmatggttaaacgaatcgccagaatcatcgcataaattattacagaagat 600
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3212 attcgctaagcaatggttaaacgaatcgccagaatcatcgcataaattattacagaagat 3271
Query: 601 tactgacgttgcggtcgaattcttgtgccaacaggtagttgctggttgtcagatgcttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3272 tactgacgttgcggtcgaattcttgtgccaacaggtagttgctggttgtcagatgcttca 3331
Query: 661 agtgtttgaaagttggggtggcgagttaggctctcgtgatttcgacgagttctctttacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3332 agtgtttgaaagttggggtggcgagttaggctctcgtgatttcgacgagttctctttacc 3391
Query: 721 gtacctyaagcaaattgcggaaagagttccaccaaggttaaagcagc 767
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3392 gtacctaaagcaaattgcggaaagagttccaccaaggttaaagcagc 3438
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4246
Number of Sequences: 1807
Number of extensions: 4246
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 767
length of database: 10,358,551
effective HSP length: 16
effective length of query: 751
effective length of database: 10,329,639
effective search space: 7757558889
effective search space used: 7757558889
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)